Bioinformatics Algorithms

In this course we will explore and implement algorithmic solutions to modern biology questions. Students will be introduced to motivating biological questions—such as, “How do we compare DNA sequences?”—and then implement solutions to those problems using dynamic programming, graph, randomized, combinatorial and/or other algorithmic approaches. At the completion of the course students will be able to precisely define computational biology problems, design an algorithmic solution and implement that solution in software. No biology background is assumed, but students are expected to be able to implement sophisticated algorithms in Python or another language of their choice. (CSCI 201) 3 hrs. lect./lab.